Ligand · BZS

BZS · L-benzylsuccinic acid

BZS, L-benzylsuccinic acid (C11 H12 O4, 208.2 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: BZS
Formula: C11 H12 O4
Class: ligand
Structures: 10
PDB entries: 5

Binding sites

BZS in 10 structures; the first of them:

1CBX · Crystal structure of the complex between carboxypeptidase a and the biproduct analog… · BZS A500 · binds HIS69, GLU72, ARG127, ASN144, ARG145, HIS196, SER197, LEU203 and 7 more
1HYT · Re-determination and refinement of the complex of benzylsuccinic acid with thermolysin… · BZS A807 · binds ASN112, ALA113, PHE114, PHE130, LEU133, VAL139, HIS142, GLU143 and 8 more
1WHT · Structure of the complex of L-benzylsuccinate with wheat serine carboxypeptidase II at… · BZS A430 · binds ASN51, GLY52, GLY53, CYS56, TYR60, GLU145, SER146, TYR147 and 4 more
4A38 · Metallo-carboxypeptidase from pseudomonas aureginosa in complex with L-benzylsuccinic acid · BZS A1376 · binds HIS167, GLU170, ARG218, ASN227, ARG228, HIS260, GLY261, TYR306 and 1 more
4DUK · Carboxypeptidase T with L-BENZYLSUCCINIC ACID · BZS A405 · binds HIS69, GLU72, ARG129, ASN146, ARG147, HIS204, THR205, LEU211 and 7 more
1CBX · Crystal structure of the complex between carboxypeptidase a and the biproduct analog… · BZS A500 · binds HIS69, GLU72, ARG127, ASN144, ARG145, HIS196, SER197, LEU203 and 7 more
1HYT · Re-determination and refinement of the complex of benzylsuccinic acid with thermolysin… · BZS A807 · binds ASN112, ALA113, PHE114, PHE130, LEU133, VAL139, HIS142, GLU143 and 8 more
1WHT · Structure of the complex of L-benzylsuccinate with wheat serine carboxypeptidase II at… · BZS A430 · binds ASN51, GLY52, GLY53, CYS56, TYR60, GLU145, SER146, TYR147 and 4 more
4A38 · Metallo-carboxypeptidase from pseudomonas aureginosa in complex with L-benzylsuccinic acid · BZS A1376 · binds HIS167, GLU170, ARG218, ASN227, ARG228, HIS260, GLY261, TYR306 and 1 more
4DUK · Carboxypeptidase T with L-benzylsuccinic acid · BZS A405 · binds HIS69, GLU72, ARG129, ASN146, ARG147, HIS204, THR205, LEU211 and 7 more

Residues it binds most

GLU 10, HIS 10, ARG 8, TYR 10, ASN 10, GLY 8, LEU 6, THR 4, ALA 6, ILE 4 (residue and the binding sites it lines).

Found with

ZN · Zinc ion
CA · Calcium ion
FUC · alpha-L-fucopyranose
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
NDG · 2-acetamido-2-deoxy-alpha-D-glucopyranose
SO4 · Sulfate ion
DMS · Dimethyl sulfoxide
GOL · Glycerol

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