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Ligand · BU2

BU2 · 1,3-butanediol

BU2, 1,3-butanediol (C4 H10 O2, 90.1 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (9 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
BU2
Formula
C4 H10 O2
Class
additive
Structures
12
PDB entries
9

Binding sites

BU2 in 12 structures; the first of them:

  • 5EKY · Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W… · BU2 A301 · binds THR18, LEU20, CYS47, VAL73, ASP102, LYS167, SER169, THR170 and 4 more
  • 5I3T · Native Structure of the Linalool Dehydratase-Isomerase from Castellaniella defragrans · BU2 A501 · binds VAL92, TYR95, TYR269, TRP273, VAL322, LEU324, LEU370, LEU371 and 2 more
  • 5MEX · Sulphotransferase-18 from Arabidopsis thaliana in complex with 3'-phosphoadenosine… · BU2 A413 · binds ARG51, LEU190, HIS191, GLU193, GLY198, PRO199
  • 7C6I · Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an… · BU2 B504 · binds LYS405, GLY190, GLY191, GLU192, ARG195, ALA204
  • 7D30 · Structure of sybody MR17-SR31 fusion in complex with the SARS-CoV-2 S Receptor Binding… · BU2 A1309 · binds SER1000, ALA1024, SER1025, GLY1026, PHE1027, PRO1028, ASN1077
  • 8IGI · Crystal structure of HP1526 (XthA)- a base excision DNA repair protein in Helicobacter… · BU2 A303 · binds ASN108, ASN146, ALA164, TRP199, TRP213, ILE215
  • 5MEX · Sulphotransferase-18 from arabidopsis thaliana in complex with 3'- phosphoadenosine… · BU2 A413 · binds ARG51, LEU190, HIS191, GLU193, GLY198, PRO199
  • 6EQS · Human SIRT5 in complex with stalled peptidylimidate intermediate of inhibitory compound 29 · BU2 A408 · binds CYS181, PRO182, GLU202, LYS203, LEU204, PRO205, ARG206, GLU208
  • 6UMJ · Crystal structure of erenumab Fab-C · BU2 H301 · binds GLY33, HIS35, VAL50, SER52, ILE57, ASP99, TYR104, TYR112 and 2 more
  • 7C6I · Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an… · BU2 B504 · binds GLY190, GLY191, GLU192, ARG195
  • 7D30 · Structure of sybody MR17-SR31 fusion in complex with the SARS-cov-2 S receptor binding… · BU2 A1309 · binds ALA1024, SER1025, GLY1026, PHE1027, ASN1077
  • 7TWA · Crystal structure of apo besc from streptomyces cattleya · BU2 C301 · binds LEU85, GLU112, TYR157, ASP172, SER176

Residues it binds most

GLY 12, VAL 10, ASN 11, LEU 11, TYR 11, PHE 9, ALA 11, PRO 10, GLU 9, SER 9 (residue and the binding sites it lines).

Found with

  • ACT · Acetate ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • PAP · 3'-phosphate-adenosine-5'-diphosphate
  • SO2 · Sulfur dioxide
  • SZZ · Sinigrin
  • CD · Cadmium ion
  • BGC · beta-D-glucopyranose
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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