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Ligand · BD9

BD9 · N-undecanoyl-L-histidyl-L-histidyl-N-methyl-N-(2-pyridin-2-ylethyl)-L-tyrosinamide

BD9, N-undecanoyl-L-histidyl-L-histidyl-N-methyl-N-(2-pyridin-2-ylethyl)-L-tyrosinamide (C40 H55 N9 O5, 741.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5…

Component
BD9
Formula
C40 H55 N9 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

BD9 in 2 structures; the first of them:

  • 3HXF · Engineered RabGGTase in complex with a peptidomimetic inhibitor (compound 32) · BD9 B334 · binds ASP61, TYR44, LEU45, SER48, TYR51, TRP52, LEU96, TYR97 and 19 more
  • 3HXF · Engineered rabggtase in complex with a peptidomimetic inhibitor (compound 32) · BD9 B334 · binds ASP61, TYR44, LEU45, SER48, TYR51, TRP52, LEU96, TYR97 and 19 more

Residues it binds most

TYR 2, CYS 2, PHE 2, LEU 2, ASP 2, HIS 2, SER 2, TRP 2, ARG 2, GLN 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion

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