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Ligand · B7J

B7J · 2'-deoxy-5-formylcytidine 5'-(tetrahydrogen triphosphate)

B7J, 2'-deoxy-5-formylcytidine 5'-(tetrahydrogen triphosphate) (C10 H16 N3 O14 P3, 495.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
B7J
Formula
C10 H16 N3 O14 P3
Class
ligand
Structures
1
PDB entries
1

Binding sites

B7J in 1 structure; the first of them:

  • 5WNZ · DNA polymerase beta substrate complex with incoming 5-fodctp · B7J A406 · binds DG6, DC10, GLY179, SER180, ARG183, SER188, GLY189, ASP190 and 8 more

Residues it binds most

ASP 1, GLY 1, SER 1, ARG 1, ASN 1, DC 1, DG 1, PHE 1, THR 1, TYR 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • NA · Sodium ion
  • CL · Chloride ion

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