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Ligand · AX9

AX9 · DiCys-(15,16)-Dihydrobiliverdin

AX9, DiCys-(15,16)-Dihydrobiliverdin (C33 H40 N4 O6, 588.7 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
AX9
Formula
C33 H40 N4 O6
Class
ligand
Structures
4
PDB entries
4

Binding sites

AX9 in 4 structures; the first of them:

  • 7SSF · Light harvesting phycobiliprotein HaPE560 from the cryptophyte Hemiselmis andersenii… · AX9 B201 · binds TYR66, ASP67, LYS68, GLN69, ARG70, GLY71, CYS50, ILE51 and 16 more
  • 7T7U · Light Harvesting complex phycocyanin PC 630, from the cryptophyte Chroomonas sp. M1627 · AX9 B201 · binds LEU64, LYS65, ALA66, THR67, VAL71, PRO72, GLN73, ILE74 and 16 more
  • 8EL4 · Light harvesting phycobiliprotein HaPE555 from the cryptophyte Hemiselmis andersenii… · AX9 B201 · binds TYR57, GLY58, ILE59, LYS60, ARG61, PHE62, GLY63, ALA64 and 24 more
  • 8EL5 · Light harvesting phycobiliprotein HaPE555 from the cryptophyte Hemiselmis andersenii… · AX9 B201 · binds TYR57, GLY58, ILE59, LYS60, ARG61, PHE62, GLY63, ALA64 and 21 more

Residues it binds most

GLY 12, GLN 12, ILE 12, LYS 12, SER 12, CYS 12, ALA 12, ARG 11, THR 12, PHE 12 (residue and the binding sites it lines).

Found with

  • PEB · Phycoerythrobilin
  • GOL · Glycerol
  • CYC · Phycocyanobilin
  • M1V · mesobiliverdin IX(alpha)
  • CL · Chloride ion
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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