Ligand · AWB
AWB · [(2R,3S,6S,7R,8R)-3-[(3-formamido-2-oxidanyl-phenyl)carbonylamino]-8-hexyl-2,6-dimethyl-4,9-bis(oxidanylidene)-1,5-dioxonan-7-yl] 3-methylbutanoate
AWB, [(2R,3S,6S,7R,8R)-3-[(3-formamido-2-oxidanyl-phenyl)carbonylamino]-8-hexyl-2,6-dimethyl-4,9-bis(oxidanylidene)-1,5-dioxonan-7-yl] 3-methylbutanoate (C28 H40 N2 O9, 548.6 g/mol), in the MolNFT structures on GenesisL1: bound in 5…
- Component
- AWB
- Formula
- C28 H40 N2 O9
- Class
- ligand
- Structures
- 5
- PDB entries
- 5
Binding sites
AWB in 5 structures; the first of them:
- 8AB7 · Complex III2 from Yarrowia lipolytica, atovaquone and antimycin A bound · AWB C507 · binds ALA13, TYR16, VAL17, GLN22, LEU26, TRP30, ASN31, GLY33 and 12 more
- 8ABH · Complex III2 from Yarrowia lipolytica, antimycin A bound, b-position · AWB C506 · binds ALA13, TYR16, VAL17, GLN22, LEU26, TRP30, ASN31, GLY33 and 12 more
- 8ABI · Complex III2 from Yarrowia lipolytica,antimycin A bound, int-position · AWB C506 · binds ALA13, TYR16, VAL17, GLN22, LEU26, TRP30, ASN31, GLY33 and 12 more
- 8ABJ · Complex III2 from Yarrowia lipolytica, antimycin A bound, c-position · AWB C506 · binds ALA13, TYR16, VAL17, GLN22, LEU26, TRP30, ASN31, SER34 and 11 more
- 8ABL · Complex III2 from Yarrowia lipolytica, with decylubiquinol and antimycin A, consensus… · AWB C507 · binds ALA13, TYR16, VAL17, GLN22, LEU26, TRP30, ASN31, GLY33 and 12 more
Residues it binds most
ALA 10, LEU 10, SER 10, TYR 10, ASN 10, ASP 10, GLN 10, LYS 10, MET 10, TRP 10 (residue and the binding sites it lines).
Found with
- CDL · Cardiolipin
- HEC · Heme C
- HEM · Protoporphyrin IX containing Fe
- PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine
- PTY · Phosphatidylethanolamine
- XP4 · 1,2-dimyristoyl-sn-glycero-3-phosphate
- LMT · Dodecyl-beta-D-maltoside
- FES · Fe2/s2 (inorganic) cluster
- AOQ · 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione
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