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Ligand · AU1

AU1 · 5'-O-[(R)-hydroxy(phosphonoamino)phosphoryl]adenosine

AU1, 5'-O-[(R)-hydroxy(phosphonoamino)phosphoryl]adenosine (C10 H16 N6 O9 P2, 426.2 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
AU1
Formula
C10 H16 N6 O9 P2
Class
ligand
Structures
10
PDB entries
5

Binding sites

AU1 in 10 structures; the first of them:

  • 4BR0 · rat NTPDase2 in complex with Ca AMPNP · AU1 A1462 · binds GLY47, SER48, SER49, HIS50, THR122, ALA123, GLY124, GLU165 and 11 more
  • 4BR7 · Legionella pneumophila NTPDase1 crystal form I, open, AMPNP complex · AU1 A1394 · binds THR53, LYS80, LYS82, GLY189, GLN231, THR232, GLY299, ASN302 and 6 more
  • 4BRC · Legionella pneumophila NTPDase1 crystal form II, closed, Mg AMPNP complex · AU1 A1397 · binds ASP49, GLY51, SER52, THR53, GLY54, ARG56, THR118, ALA119 and 16 more
  • 4KH5 · Toxoplasma gondii NTPDase1 C258S/C268S in complex with Mg and AMPNP · AU1 A700 · binds ASP70, GLY72, SER73, SER74, SER75, ARG77, THR188, ALA189 and 5 more
  • 4KH6 · Toxoplasma gondii NTPDase1 C258S/C268S E493G crystallized with Mg and AMPNP · AU1 A700 · binds ASP70, GLY72, SER73, SER74, ARG77, THR188, GLY279, GLY280 and 8 more
  • 4BR0 · Rat NTPDASE2 in complex with ca ampnp · AU1 A1462 · binds GLY47, SER48, SER49, HIS50, THR122, ALA123, GLY124, GLU165 and 11 more
  • 4BR7 · Legionella pneumophila NTPDASE1 crystal form I, open, ampnp complex · AU1 A1394 · binds THR53, LYS80, LYS82, GLY189, GLN231, THR232, GLY299, ASN302 and 6 more
  • 4BRC · Legionella pneumophila NTPDASE1 crystal form II, closed, mg ampnp complex · AU1 A1397 · binds ASP49, GLY51, SER52, THR53, GLY54, ARG56, THR118, ALA119 and 16 more
  • 4KH5 · Toxoplasma gondii NTPDASE1 C258S/C268S in complex with mg and ampnp · AU1 A700 · binds ASP70, GLY72, SER73, SER74, SER75, ARG77, THR188, ALA189 and 5 more
  • 4KH6 · Toxoplasma gondii NTPDASE1 C258S/C268S E493G crystallized with mg and ampnp · AU1 A700 · binds ASP70, GLY72, SER73, SER74, ARG77, THR188, GLY279, GLY280 and 8 more

Residues it binds most

GLY 16, SER 14, ALA 14, THR 16, ARG 14, TYR 8, LEU 10, ASP 14, GLU 12, MET 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion
  • CA · Calcium ion
  • GOL · Glycerol
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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