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Ligand · ASP

ASP · Aspartic acid

ASP, Aspartic acid (C4 H7 N O4, 133.1 g/mol), in the MolNFT structures on GenesisL1: bound in 85 records (82 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
ASP
Formula
C4 H7 N O4
Class
ligand
Structures
85
PDB entries
82

Binding sites

ASP in 85 structures; the first of them:

  • 4XMW · Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with… · ASP A902 · binds ALA260, GLY261, ALA262, GLU264, HIS297, GLU298, HIS301, GLU320 and 2 more
  • 5E9S · Crystal structure of substrate-bound glutamate transporter homologue GltTk · ASP A501 · binds ARG278, SER279, SER280, MET314, THR317, THR355, ALA356, GLY357 and 9 more
  • 5I3Z · Erwinia chrysanthemi L-asparaginase E63Q mutation + Aspartic acid · ASP A400 · binds GLY14, THR15, ALA31, ALA61, SER62, GLN63, GLY94, THR95 and 4 more
  • 5K4G · Wolinella succinogenes L-asparaginase S121 + L-aspartic acid, open conformation · ASP A400 · binds GLY59, SER60, GLN61, GLY92, THR93, ASP94, ALA118, MET119 and 3 more
  • 5LLM · Structure of the thermostabilized EAAT1 cryst mutant in complex with L-ASP and the… · ASP A602 · binds SER343, SER344, SER345, MET379, THR382, ALA421, GLY422, ILE423 and 8 more
  • 5LLU · Structure of the thermostabilized EAAT1 cryst-II mutant in complex with L-ASP · ASP A602 · binds SER343, SER344, SER345, MET379, THR382, ALA421, GLY422, ILE423 and 8 more
  • 5MQ5 · A protease-resistant N24S Escherichia coli Asparaginase mutant with outstanding stability… · ASP A401 · binds GLY11, THR12, ILE56, GLY57, SER58, GLN59, GLY88, THR89 and 6 more
  • 5W25 · Crystal structure of Aspartyl-tRNA synthetase from Mycobacterium tuberculosis complexed… · ASP A701 · binds GLU173, SER195, GLN197, LYS200, ARG219, GLN233, HIS451, HIS452 and 6 more
  • 5WXY · Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with… · ASP A301 · binds MET14, GLY15, ASP52, ARG53, GLY86, SER87, CYS88, THR89 and 8 more
  • 6A4R · Crystal structure of aspartate bound peptidase E from Salmonella enterica · ASP A301 · binds GLY87, GLY88, THR90, SER120, ALA121, ASN124, THR133, ASN134 and 5 more
  • 6B5Z · IMPase (AF2372) with 25 mM Asp · ASP A305 · binds ARG11, ALA14, GLY15, ARG18, TYR116, TYR118, GLU125
  • 6B61 · IMPase (AF2372) with 25 mM Asp · ASP A303 · binds ARG11, ALA14, GLY15, TYR116, TYR118, GLU125
  • 6B64 · IMPase (AF2372) with 25 mM Asp · ASP A501 · binds ARG11, ALA14, GLY15, TYR116, TYR118, GLU125

Residues it binds most

GLY 183, THR 180, SER 167, ALA 180, ARG 113, ASP 168, MET 141, ASN 135, GLU 97, GLN 101 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • GOL · Glycerol
  • MG · Magnesium ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • CL · Chloride ion
  • PO4 · Phosphate ion
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether
  • 6Z6 · 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile
  • ATP · Adenosine-5'-triphosphate
  • CA · Calcium ion

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