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Ligand · APW

APW · {5'-O-[(R)-{[(S)-amino(hydroxy-kappao)phosphoryl]oxy}(hydroxy-kappao)phosphoryl]adenosinato(2-)}magnesium

APW, {5'-O-[(R)-{[(S)-amino(hydroxy-kappao)phosphoryl]oxy}(hydroxy-kappao)phosphoryl]adenosinato(2-)}magnesium (C10 H14 Mg N6 O9 P2, 448.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
APW
Formula
C10 H14 Mg N6 O9 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

APW in 2 structures; the first of them:

  • 2DEJ · Crystal Structure of galaktokinase from Pyrococcus horikoshii with AMP-PN and galactose · APW A402 · binds THR33, SER47, PHE50, TRP67, TYR70, VAL92, SER93, PRO97 and 11 more
  • 2DEJ · Crystal structure of galaktokinase from pyrococcus horikoshii with AMP-pn and galactose · APW A402 · binds THR33, SER47, PHE50, TRP67, TYR70, VAL92, SER93, PRO97 and 11 more

Residues it binds most

SER 2, GLY 2, LEU 2, PHE 2, ALA 2, ARG 2, GLU 2, PRO 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • GLA · alpha-D-galactopyranose

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