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Ligand · AOF

AOF · N-(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-5-O-phosphono-beta-D-ribofuranosylamine

AOF, N-(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-5-O-phosphono-beta-D-ribofuranosylamine (C9 H15 N4 O9 P, 354.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
AOF
Formula
C9 H15 N4 O9 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

AOF in 2 structures; the first of them:

  • 4G3M · Complex Structure of Bacillus subtilis RibG: The Deamination Process in Riboflavin… · AOF B402 · binds ASN23, PRO24, VAL26, HIS42, HIS49, ALA50, GLU51, LEU71 and 12 more
  • 4G3M · Complex structure of bacillus subtilis ribg: the deamination process in riboflavin… · AOF B402 · binds ASN23, PRO24, VAL26, HIS42, HIS49, ALA50, GLU51, LEU71 and 12 more

Residues it binds most

HIS 6, CYS 6, GLU 6, PRO 6, ASN 6, VAL 6, ALA 6, ASP 6, GLY 6, LYS 6 (residue and the binding sites it lines).

Found with

  • AI9 · [(2R,3S,4S,5E)-5-[[5-azanyl-2,4-bis(oxidanylidene)-1H-pyrimidin-6-yl]imino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
  • ZN · Zinc ion

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