GL1X · GenesisL1 explorer

Ligand · AI9

AI9 · [(2R,3S,4S,5E)-5-[[5-azanyl-2,4-bis(oxidanylidene)-1H-pyrimidin-6-yl]imino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate

AI9, [(2R,3S,4S,5E)-5-[[5-azanyl-2,4-bis(oxidanylidene)-1H-pyrimidin-6-yl]imino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate (C9 H15 N4 O9 P, 354.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
AI9
Formula
C9 H15 N4 O9 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

AI9 in 2 structures; the first of them:

  • 4G3M · Complex Structure of Bacillus subtilis RibG: The Deamination Process in Riboflavin… · AI9 A402 · binds LYS151, ALA153, SER167, TRP169, ILE170, THR171, ARG176, ARG183 and 9 more
  • 4G3M · Complex structure of bacillus subtilis ribg: the deamination process in riboflavin… · AI9 A402 · binds LYS151, ALA153, SER167, TRP169, ILE170, THR171, ARG176, ARG183 and 9 more

Residues it binds most

ARG 8, THR 8, SER 8, ALA 8, ASP 8, GLU 8, ILE 8, LEU 8, LYS 8, PRO 8 (residue and the binding sites it lines).

Found with

  • AOF · N-(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-5-O-phosphono-beta-D-ribofuranosylamine
  • ZN · Zinc ion

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