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Ligand · AJM

AJM · Ajmaline

AJM, Ajmaline (C18 H22 N2 O2, 298.4 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
AJM
Formula
C18 H22 N2 O2
Class
ligand
Structures
8
PDB entries
4

Binding sites

AJM in 8 structures; the first of them:

  • 1ZR8 · Crystal Structure of the complex formed between group II phospholipase A2 and a plant… · AJM A201 · binds GLY32, GLY33, ASP49, CYS50, TYR52, GLY53, PRO56
  • 2QUE · Saturation of substrate-binding site using two natural ligands: Crystal structure of a… · AJM A201 · binds GLY32, ASP49, CYS50, TYR52, GLY53, PRO56, PRO68
  • 3CBI · Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic… · AJM A203 · binds TRP31, GLY32, GLY33, ASP49
  • 3FG5 · Crystal structure determination of a ternary complex of phospholipase A2 with a… · AJM A134 · binds TYR28, GLY33, ASP49, CYS50, TYR52, GLY53, LEU130, CYS133
  • 1ZR8 · Crystal structure of the complex formed between group II phospholipase A2 and a plant… · AJM A201 · binds GLY32, GLY33, ASP49, CYS50, TYR52, GLY53, PRO56
  • 2QUE · Saturation of substrate-binding site using two natural ligands: crystal structure of a… · AJM A201 · binds GLY32, ASP49, CYS50, TYR52, GLY53, PRO56, PRO68
  • 3CBI · Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic… · AJM C201 · binds TYR28, TRP31, GLY32, GLY33, ASP49
  • 3FG5 · Crystal structure determination of a ternary complex of phospholipase A2 with a… · AJM A134 · binds TYR28, GLY33, ASP49, CYS50, TYR52, GLY53, LEU130, CYS133

Residues it binds most

GLY 14, ASP 14, TYR 10, CYS 6, TRP 8, PRO 4, LEU 2 (residue and the binding sites it lines).

Found with

  • ANN · 4-methoxybenzoic acid
  • SO4 · Sulfate ion
  • ACY · Acetic acid

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