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Ligand · AGO

AGO · 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one

AGO, 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one (C18 H22 N7 O14 P3, 653.3 g/mol), in the MolNFT…

Component
AGO
Formula
C18 H22 N7 O14 P3
Class
ligand
Structures
4
PDB entries
2

Binding sites

AGO in 4 structures; the first of them:

  • 3HYT · Structural Basis of GDP Release and Gating in G Protein Coupled Fe2+ Transport · AGO A801 · binds ASN11, PRO12, ASN13, SER14, GLY15, LYS16, THR17, THR18 and 8 more
  • 3LX5 · Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus · AGO A300 · binds ASN9, PRO10, ASN11, SER12, GLY13, LYS14, THR15, SER16 and 20 more
  • 3HYT · Structural basis of GDP release and gating in G protein coupled FE2+ transport · AGO A801 · binds ASN11, PRO12, ASN13, SER14, GLY15, LYS16, THR17, THR18 and 8 more
  • 3LX5 · Crystal structure of mgmppnp-bound nfeob from S. thermophilus · AGO A300 · binds ASN9, PRO10, ASN11, SER12, GLY13, LYS14, THR15, SER16 and 20 more

Residues it binds most

ASN 8, THR 8, GLY 8, SER 8, PRO 8, VAL 6, ASP 8, LYS 8, MET 8, ILE 6 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GOL · Glycerol

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