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Ligand · A6R

A6R · arsenoplatin-1

A6R, arsenoplatin-1 (C4 H8 As N2 O4 Pt, 418.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
A6R
Formula
C4 H8 As N2 O4 Pt
Class
ligand
Structures
6
PDB entries
5

Binding sites

A6R in 6 structures; the first of them:

  • 5NJ1 · The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme… · A6R A208 · binds ARG14, HIS15, ASP87, THR89
  • 6ZS8 · X-ray structure of the adduct formed upon treating lysozyme with an aged solution of… · A6R AAA406 · binds ARG14, HIS15, ASP87, THR89
  • 8C64 · Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 48 h of soaking · A6R A102 · binds DC1, DG2, DC3, DG22
  • 5NJ1 · The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme… · A6R A208 · binds ARG14, HIS15, ASP87, THR89
  • 5NJ7 · The X-ray structure of the adduct formed in the reaction between bovine pancreatic… · A6R A201 · binds THR78, HIS105
  • 7BD7 · X-ray structure of arsenoplatin-1-encapsulated horse spleen ferritin · A6R A223 · binds GLU45, HIS49, ARG52, GLU53

Residues it binds most

HIS 9, LYS 6, THR 5, ARG 4, ASP 3, ASN 2, DC 1, DG 1, GLN 2, GLU 1 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • NO3 · Nitrate ion
  • EDO · 1,2-ethanediol
  • CD · Cadmium ion
  • PT · Platinum (II) ion
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide
  • GOL · Glycerol

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