Ligand · A3B

A3B · D-vinylglycine

A3B, D-vinylglycine (C4 H7 N O2, 101.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: A3B
Formula: C4 H7 N O2
Class: ligand
Structures: 4
PDB entries: 2

Binding sites

A3B in 4 structures; the first of them:

1TZJ · Crystal Structure of 1-aminocyclopropane-1-carboxylate deaminase complexed with d-vinyl… · A3B A501 · binds LYS51, ILE73, GLY74, SER78, ASN79, GLN80, ALA160, GLY161 and 3 more
3SH3 · Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL · A3B A241 · binds TRP88, SER113, LYS114, LEU115, ASN124, SER125, LEU126, PRO178 and 2 more
1TZJ · Crystal structure of 1-aminocyclopropane-1-carboxylate deaminase complexed with D-vinyl… · A3B A501 · binds LYS51, ILE73, GLY74, SER78, ASN79, GLN80, ALA160, GLY161 and 3 more
3SH3 · Crystal structure of a pro-inflammatory lectin from the seeds of dioclea wilsonii standl · A3B A241 · binds TRP88, SER113, LYS114, LEU115, ASN124, SER125, LEU126, PRO178 and 2 more

Residues it binds most

GLY 4, SER 6, TYR 4, ASN 6, GLN 4, LYS 6, LEU 2, THR 4, TRP 4, ALA 2 (residue and the binding sites it lines).

Found with

PLP · Pyridoxal-5'-phosphate
XMM · 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside
CA · Calcium ion
MN · Manganese (II) ion
CL · Chloride ion
SO4 · Sulfate ion

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