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Ligand · A2Q

A2Q · cyclohex-2-en-1-one

A2Q, cyclohex-2-en-1-one (C6 H8 O, 96.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
A2Q
Formula
C6 H8 O
Class
ligand
Structures
5
PDB entries
5

Binding sites

A2Q in 5 structures; the first of them:

  • 1GVQ · Structure of pentaerythritol tetranitrate reductase and complexed with 2-cyclohexenone · A2Q A500 · binds THR26, TYR68, TRP102, HIS181, HIS184, TYR186, GLN241, TYR351
  • 3ZOG · Crystal structure of FMN-binding protein (NP_142786.1) from Pyrococcus horikoshii with… · A2Q A200 · binds HIS-7, TYR8, ASP29, TRP30, ARG49, HIS124, TRP158
  • 3ZOH · Crystal structure of FMN-binding protein (YP_005476) from Thermus thermophilus with bound… · A2Q A200 · binds TYR17, VAL38, TRP39, ARG58, HIS131, TYR162
  • 8AM6 · Cyclohexa dehydrogenase (CDH) from Alicycliphilus denitrificans K601 complexed with… · A2Q AAA602 · binds ALA111, TRP113, PHE352, TYR376, TYR415, PHE496, LEU530, TYR570 and 4 more
  • 8AM8 · Cyclohexa dehydrogenase (CDH) from Alicycliphilus denitrificans K601 complexed with… · A2Q BBB608 · binds ALA111, ALA113, TYR195, PHE352, TYR376, TYR415, PHE496, LEU530 and 5 more

Residues it binds most

TYR 16, ALA 4, GLY 8, TRP 10, HIS 8, LEU 8, PHE 6, ARG 8, SER 4, VAL 6 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide
  • FAD · Flavin-adenine dinucleotide
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether

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