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Ligand · A1BD5

A1BD5 · oxopyricid

A1BD5, oxopyricid (C8 H5 N3 O4, 207.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
A1BD5
Formula
C8 H5 N3 O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

A1BD5 in 2 structures; the first of them:

  • 9E1H · Structure of RyR1 in the primed state in the presence of oxopyricid · A1BD5 A5304 · binds PHE3753, GLN4246, TRP4716, ILE4996, TRP5011, TYR5014
  • 9E1I · Structure of RyR1 in the open state in the presence of oxopyricid · A1BD5 A5304 · binds PHE3753, GLU4239, ILE4242, GLN4246, TRP4716, ILE4996, TRP5011, TYR5014

Residues it binds most

TRP 8, ILE 8, GLN 8, PHE 8, TYR 8, GLU 4 (residue and the binding sites it lines).

Found with

  • ATP · Adenosine-5'-triphosphate
  • CA · Calcium ion
  • ZN · Zinc ion

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