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Ligand · A1ANT

A1ANT · [(3~{S},4~{R},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate

A1ANT, [(3~{S},4~{R},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate (C9 H15 N2 O14 P3, 468.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
A1ANT
Formula
C9 H15 N2 O14 P3
Class
ligand
Structures
2
PDB entries
2

Binding sites

A1ANT in 2 structures; the first of them:

  • 9BEZ · MID domain of human Argo2 bound to RNA · A1ANT A601 · binds LEU522, GLY524, TYR529, LYS533, THR544, GLN545, CYS546, VAL547 and 3 more
  • 9CIQ · Crystal structure of human polymerase eta with incoming threofuranosyl thymine nucleoside… · A1ANT A501 · binds ASP13, MET14, ASP15, CYS16, PHE17, PHE18, ALA49, TYR52 and 9 more

Residues it binds most

LYS 4, GLN 3, ASP 2, CYS 4, TYR 4, GLY 3, LEU 3, THR 3, ARG 1, DA 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • PEG · Di(hydroxyethyl)ether

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