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Ligand · 8LM

8LM · 2,6-anhydro-3,5-dideoxy-5-[(2-methylpropanoyl)amino]-3-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-enoni c acid

8LM, 2,6-anhydro-3,5-dideoxy-5-[(2-methylpropanoyl)amino]-3-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-enoni c acid (C21 H26 N4 O8, 462.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
8LM
Formula
C21 H26 N4 O8
Class
ligand
Structures
2
PDB entries
1

Binding sites

8LM in 2 structures; the first of them:

  • 6C0M · The synthesis, biological evaluation and structural insights of unsaturated… · 8LM A610 · binds CYS190, VAL191, ARG192, THR193, CYS214, LYS254, SER255, GLU276 and 8 more
  • 6C0M · The synthesis, biological evaluation and structural insights of unsaturated… · 8LM A610 · binds CYS190, ARG192, THR193, CYS214, GLU276, TYR319, TYR337, GLU409 and 4 more

Residues it binds most

ARG 6, GLU 4, CYS 4, THR 6, TYR 4, VAL 5, PHE 4, SER 5, ASN 2, LEU 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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