GL1X · GenesisL1 explorer

Ligand · 8JY

8JY · [2-[[(2~{R})-2-hexanoyloxy-3-[(~{E})-hex-3-enoxy]propoxy]-oxidanyl-phosphoryl]oxy-3,4,5,6-tetrakis(oxidanyl)phenyl] (2~{E},4~{E})-hepta-2,4-dienoate

8JY, [2-[[(2~{R})-2-hexanoyloxy-3-[(~{E})-hex-3-enoxy]propoxy]-oxidanyl-phosphoryl]oxy-3,4,5,6-tetrakis(oxidanyl)phenyl] (2~{E},4~{E})-hepta-2,4-dienoate (C28 H47 O13 P, 622.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
8JY
Formula
C28 H47 O13 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

8JY in 2 structures; the first of them:

  • 7W72 · Structure of a human glycosylphosphatidylinositol (GPI) transamidase · 8JY U501 · binds ASN383, ASN385, PHE386, ALA389, ILE390, LEU392, THR393, ASP521 and 4 more
  • 7W72 · Structure of a human glycosylphosphatidylinositol (gpi) transamidase · 8JY U501 · binds ASN383, ASN385, PHE386, ALA389, ILE390, LEU392, ASP521, SER523 and 2 more

Residues it binds most

ASN 2, LEU 2, ALA 2, ASP 2, ILE 2, MET 2, PHE 2, SER 2, THR 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BMA · beta-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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