GL1X · GenesisL1 explorer

Ligand · 89Y

89Y · (3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-one

89Y, (3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-one (C5 H8 O5, 148.1 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
89Y
Formula
C5 H8 O5
Class
ligand
Structures
1
PDB entries
1

Binding sites

89Y in 1 structure; the first of them:

  • 5UHZ · Crystal structure of an oxidoreductase from agrobacterium radiobacter in complex with… · 89Y A402 · binds LYS98, PHE127, VAL161, GLN165, ASP178, HIS182, TYR232, TRP288

Residues it binds most

ASP 2, GLN 2, HIS 2, LYS 2, PHE 2, TYR 2, VAL 2, ILE 1, TRP 1 (residue and the binding sites it lines).

Found with

  • NAD · Nicotinamide-adenine-dinucleotide
  • MG · Magnesium ion

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