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Ligand · 88Q

88Q · 1,5:6,10-dianhydro-3,4,7,8-tetradeoxy-2,9-bis-C-(hydroxymethyl)-L-manno-decitol

88Q, 1,5:6,10-dianhydro-3,4,7,8-tetradeoxy-2,9-bis-C-(hydroxymethyl)-L-manno-decitol (C12 H22 O6, 262.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
88Q
Formula
C12 H22 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

88Q in 2 structures; the first of them:

  • 4AIZ · Crystallographic structure of 3mJL2 from the germinal line lambda 3 · 88Q D1109 · binds GLN37, PRO43, TYR86, GLN37, LYS38, PRO39, GLY40, GLN41 and 10 more
  • 4AIZ · Crystallographic structure of 3MJL2 from the germinal line lambda 3 · 88Q D1109 · binds GLN37, PRO43, TYR86, GLN37, LYS38, PRO39, GLY40, GLN41 and 10 more

Residues it binds most

GLN 2, PRO 2, GLY 2, LYS 2, TYR 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CIT · Citric acid

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