GL1X · GenesisL1 explorer

Ligand · 85I

85I · [(2~{R})-2-[2-(methylamino)ethoxy-oxidanyl-phosphoryl]oxy-2-(13-methyltetradecanoyloxy)ethyl] 13-methyltetradecanoate

85I, [(2~{R})-2-[2-(methylamino)ethoxy-oxidanyl-phosphoryl]oxy-2-(13-methyltetradecanoyloxy)ethyl] 13-methyltetradecanoate (C35 H70 N O8 P, 663.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every…

Component
85I
Formula
C35 H70 N O8 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

85I in 2 structures; the first of them:

  • 7VZG · Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the… · 85I A915 · binds TYR313, PHE316, ILE320, PHE323, LEU324, ARG327, ARG352, THR359 and 23 more
  • 7VZR · Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the… · 85I A915 · binds PHE316, ILE320, PHE323, LEU324, ARG327, LEU636, TYR637, SER638 and 11 more

Residues it binds most

PHE 10, LEU 12, VAL 11, SER 12, ILE 12, ARG 9, TRP 11, TYR 4, GLY 6, GLN 8 (residue and the binding sites it lines).

Found with

  • 2GO · [methyl 9-acetyl-14-ethyl-20-hydroxy-4,8,13,18-tetramethyl-3-{3-oxo-3-[(3,7,11,15-tetramethylhexadec-2-en-1-yl)oxy]propyl}-3,4,20,21-tetradehydrophorbine-21-carboxylatato(2-)-kappa~4~N~23~,N~24~,N~25~,N~26~]zinc
  • 84Q · [(2S)-2-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-(13-methyltetradecanoyloxy)ethyl] 13-methyltetradecanoate
  • 85N · [(2~{S})-2-[[(1~{R})-1,2-bis(13-methyltetradecanoyloxy)ethoxy]methyl]-3-oxidanyl-3-oxidanylidene-propyl]-trimethyl-azanium
  • BCL · Bacteriochlorophyll A
  • CLA · Chlorophyll A
  • HEC · Heme C
  • LYC · Lycopene
  • SF4 · Iron/sulfur cluster
  • UNL · Unknown ligand
  • CA · Calcium ion

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