Ligand · 6Y2
6Y2 · ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S}, 4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
6Y2, ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S}, 4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide (C22 H31 N3 O13, 545.5 g/mol)…
- Component
- 6Y2
- Formula
- C22 H31 N3 O13
- Class
- ligand
- Structures
- 6
- PDB entries
- 3
Binding sites
6Y2 in 6 structures; the first of them:
- 5KXC · Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 8.5. · 6Y2 A303 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
- 5KXD · Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 6.5 · 6Y2 A306 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
- 5KXE · Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 4.2 · 6Y2 A306 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
- 5KXC · Wisteria floribunda lectin in complex with GALNAC(BETA1-4)GLCNAC (lacdinac) at pH 8.5. · 6Y2 A303 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
- 5KXD · Wisteria floribunda lectin in complex with GALNAC(BETA1-4)GLCNAC (lacdinac) at pH 6.5 · 6Y2 A306 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
- 5KXE · Wisteria floribunda lectin in complex with GALNAC(BETA1-4)GLCNAC (lacdinac) at pH 4.2 · 6Y2 A306 · binds ASP117, GLY134, GLY135, PHE159, ASN161, GLY244, LEU245, SER246 and 1 more
Residues it binds most
GLY 24, ASN 24, ASP 24, HIS 24, LEU 24, PHE 24, SER 24, TRP 6, PRO 2 (residue and the binding sites it lines).
Found with
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