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Ligand · 6ES

6ES · (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4S,5S,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-3-(pentanoyloxy)propan-2-yl decanoate

6ES, (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4S,5S,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-3-(pentanoyloxy)propan-2-yl decanoate (C24 H45 O13 P, 572.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB…

Component
6ES
Formula
C24 H45 O13 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

6ES in 2 structures; the first of them:

  • 5IRZ · Structure of TRPV1 determined in lipid nanodisc · 6ES D802 · binds VAL508, ASP509, SER510, TYR511, SER512, GLU513, LEU515, MET547 and 11 more
  • 5IRZ · Structure of TRPV1 determined in lipid nanodisc · 6ES D802 · binds VAL508, ASP509, SER510, TYR511, SER512, GLU513, LEU515, MET547 and 11 more

Residues it binds most

LEU 8, GLU 8, ILE 8, SER 8, TYR 8, ARG 8, ASP 8, GLN 8, LYS 8, MET 8 (residue and the binding sites it lines).

Found with

  • 6O8 · (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium
  • 6OE · (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate

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