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Ligand · 686

686 · N-({(1S)-5-[(4-bromobenzyl)({6-[4-(4-{4-[4-carboxy-3-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoyl]piperazin-1-yl}phenyl)piperazin-1-yl]pyridin-3-yl}carbonyl)amino]-1-carboxypentyl}carbamoyl)-L-glutamic acid

686, N-({(1S)-5-[(4-bromobenzyl)({6-[4-(4-{4-[4-carboxy-3-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoyl]piperazin-1-yl}phenyl)piperazin-1-yl]pyridin-3-yl}carbonyl)amino]-1-carboxypentyl}carbamoyl)-L-glutamic acid (C60 H59 Br N8 O14, 1196.1…

Component
686
Formula
C60 H59 Br N8 O14
Class
ligand
Structures
2
PDB entries
1

Binding sites

686 in 2 structures; the first of them:

  • 4X3R · Avi-GCPII structure in complex with FITC-conjugated GCPII-specific inhibitor · 686 A1320 · binds LYS207, PHE209, ARG210, ASN257, ASP387, GLU424, GLU425, GLY427 and 19 more
  • 4X3R · Avi-gcpii structure in complex with fitc-conjugated gcpii-specific inhibitor · 686 A1320 · binds LYS207, PHE209, ARG210, ASN257, ASP387, GLU424, GLU425, GLY427 and 19 more

Residues it binds most

ARG 2, ASN 2, ASP 2, GLU 2, GLY 2, LYS 2, SER 2, TYR 2, HIS 2, LEU 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CL · Chloride ion

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