GL1X · GenesisL1 explorer

Ligand · 653

653 · 5-(2-aminoethyl)-3-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-1,1'-biphenyl-2-olate

653, 5-(2-aminoethyl)-3-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-1,1'-biphenyl-2-olate (C22 H22 N5 O +1, 372.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues…

Component
653
Formula
C22 H22 N5 O +1
Class
ligand
Structures
4
PDB entries
2

Binding sites

653 in 4 structures; the first of them:

  • 1O37 · Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active… · 653 A246 · binds PHE41, CYS42, HIS57, CYS58, ASP189, SER190, CYS191, GLN192 and 9 more
  • 1O38 · Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active… · 653 A246 · binds PHE41, CYS42, HIS57, CYS58, ASP189, SER190, CYS191, GLN192 and 10 more
  • 1O37 · Elaborate manifold of short hydrogen bond arrays mediating binding of active… · 653 A246 · binds PHE41, CYS42, HIS57, CYS58, ASP189, SER190, CYS191, GLN192 and 9 more
  • 1O38 · Elaborate manifold of short hydrogen bond arrays mediating binding of active… · 653 A246 · binds PHE41, CYS42, HIS57, CYS58, ASP189, SER190, CYS191, GLN192 and 10 more

Residues it binds most

CYS 4, SER 4, GLY 4, ASP 4, GLN 4, HIS 4, PHE 4, TRP 4, TYR 4, VAL 4 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • SO4 · Sulfate ion

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