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Ligand · 621

621 · N-acetylglycyl-N-[(3S)-1-hydroxy-5-methyl-2-oxohexan-3-yl]-L-serinamide

621, N-acetylglycyl-N-[(3S)-1-hydroxy-5-methyl-2-oxohexan-3-yl]-L-serinamide (C14 H25 N3 O6, 331.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
621
Formula
C14 H25 N3 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

621 in 2 structures; the first of them:

  • 3PA8 · Structure of the C. difficile TcdB cysteine protease domain in complex with a peptide… · 621 A300 · binds ILE46, ALA50, ILE108, GLY109, HIS110, GLY111, LEU153, GLY154 and 6 more
  • 3PA8 · Structure of the C. difficile tcdb cysteine protease domain in complex with a peptide… · 621 A300 · binds ILE46, ALA50, ILE108, GLY109, HIS110, GLY111, LEU153, GLY154 and 6 more

Residues it binds most

GLY 4, ILE 4, ALA 4, ARG 4, CYS 4, GLU 4, HIS 4, LEU 4, TRP 4, VAL 4 (residue and the binding sites it lines).

Found with

  • IHP · Inositol hexakisphosphate
  • CA · Calcium ion
  • NA · Sodium ion

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