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Ligand · 5V3

5V3 · 8-[[(phenylmethyl)amino]methyl]-1~{H}-pyrido[3,4-d]pyrimidin-4-one

5V3, 8-[[(phenylmethyl)amino]methyl]-1~{H}-pyrido[3,4-d]pyrimidin-4-one (C15 H14 N4 O, 266.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
5V3
Formula
C15 H14 N4 O
Class
ligand
Structures
1
PDB entries
1

Binding sites

5V3 in 1 structure; the first of them:

  • 5F5C · Crystal Structure of human JMJD2D complexed with KDOPP7 · 5V3 A411 · binds TYR136, TYR179, TYR181, PHE189, HIS192, GLU194, ASN202, LYS210 and 5 more

Residues it binds most

TYR 1, ASN 1, HIS 1, ALA 1, GLU 1, ILE 1, LYS 1, PHE 1, TRP 1 (residue and the binding sites it lines).

Found with

  • NI · Nickel (II) ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol

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