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Ligand · 5IU

5IU · 5-iodo-2'-deoxyuridine-5'-monophosphate

5IU, 5-iodo-2'-deoxyuridine-5'-monophosphate (C9 H12 I N2 O8 P, 434.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
5IU
Formula
C9 H12 I N2 O8 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

5IU in 4 structures; the first of them:

  • 2QCH · Crystal structure of the orotidine-5'-monophosphate decarboxylase domain of human UMP… · 5IU A1 · binds SER257, ASP259, LYS281, HIS283, ASP312, LYS314, ILE368, GLU370 and 15 more
  • 3VTK · Thymidine kinase from herpes simplex virus type 1 in complex with ADP and… · 5IU A500 · binds HIS58, GLY59, LYS62, THR63, GLU83, TRP88, ILE97, ILE100 and 12 more
  • 2QCH · Crystal structure of the orotidine-5'-monophosphate decarboxylase domain of human ump… · 5IU A1 · binds SER257, ASP259, LYS281, HIS283, ASP312, LYS314, ILE368, GLU370 and 15 more
  • 3VTK · Thymidine kinase from herpes simplex virus type 1 in complex with ADP and… · 5IU A500 · binds HIS58, GLY59, LYS62, THR63, GLU83, TRP88, ILE97, ILE100 and 12 more

Residues it binds most

ILE 6, ASP 4, ARG 6, GLY 6, LYS 6, TYR 6, GLU 6, MET 6, SER 4, VAL 4 (residue and the binding sites it lines).

Found with

  • ADP · Adenosine-5'-diphosphate
  • UMP · 2'-deoxyuridine 5'-monophosphate
  • IOD · Iodide ion

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