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Ligand · 5CU

5CU · 2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid

5CU, 2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid (C5 H4 N2 O4, 156.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
5CU
Formula
C5 H4 N2 O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

5CU in 2 structures; the first of them:

  • 8I65 · Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with… · 5CU A301 · binds GLY66, GLN67, ASP68, PRO69, TYR70, SER80, PHE81, SER93 and 2 more
  • 8I66 · Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with… · 5CU A301 · binds GLY66, GLN67, ASP68, PRO69, TYR70, LEU79, SER80, PHE81 and 4 more

Residues it binds most

SER 2, ASN 2, ASP 2, GLN 2, GLY 2, HIS 2, PHE 2, PRO 2, TYR 2, LEU 1 (residue and the binding sites it lines).

Found with

  • CIT · Citric acid
  • EDO · 1,2-ethanediol

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