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Ligand · 4YA

4YA · hexyl 2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-galactopyranoside

4YA, hexyl 2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-galactopyranoside (C18 H34 O10, 410.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the…

Component
4YA
Formula
C18 H34 O10
Class
ligand
Structures
2
PDB entries
2

Binding sites

4YA in 2 structures; the first of them:

  • 5C49 · Crystal structure of GTB + UDP-C-Gal + H-antigen · 4YA A402 · binds HIS233, PRO234, SER235, PHE236, THR245, TYR264, MET266, TRP300 and 5 more
  • 5C4E · Crystal structure of GTB + UDP-Glc + H-antigen acceptor · 4YA A403 · binds HIS233, PRO234, SER235, PHE236, THR245, TYR264, MET266, TRP300 and 7 more

Residues it binds most

HIS 2, ALA 2, ASP 2, GLU 2, LEU 2, LYS 2, MET 2, PHE 2, PRO 2, SER 2 (residue and the binding sites it lines).

Found with

  • UDP · Uridine-5'-diphosphate
  • MN · Manganese (II) ion
  • PG0 · 2-(2-methoxyethoxy)ethanol
  • PGE · Triethylene glycol

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