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Ligand · 4E6

4E6 · (4E,6E)-hexadeca-1,4,6-triene

4E6, (4E,6E)-hexadeca-1,4,6-triene (C16 H28, 220.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
4E6
Formula
C16 H28
Class
ligand
Structures
2
PDB entries
1

Binding sites

4E6 in 2 structures; the first of them:

  • 3OAX · Crystal structure of bovine rhodopsin with beta-io · 4E6 A1410 · binds TYR43, LEU46, LEU47, LEU50, ILE256, ILE259, ALA260, THR297 and 6 more
  • 3OAX · Crystal structure of bovine rhodopsin with beta-ionone · 4E6 A1410 · binds TYR43, LEU46, LEU47, LEU50, ILE256, ILE259, ALA260, THR297 and 6 more

Residues it binds most

LEU 4, ILE 4, TYR 4, VAL 4, ALA 4, MET 4, THR 2 (residue and the binding sites it lines).

Found with

  • HTO · Heptane-1,2,3-triol
  • ID3 · (3E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-one
  • PLM · Palmitic acid
  • RET · Retinal
  • HG · Mercury (II) ion
  • ZN · Zinc ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • HTG · heptyl 1-thio-beta-D-glucopyranoside
  • ACE · Acetyl group

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