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Ligand · 420

420 · N-[2-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)ethyl]-2-iodoacetamide

420, N-[2-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)ethyl]-2-iodoacetamide (C16 H20 I N3 O3 S, 461.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within…

Component
420
Formula
C16 H20 I N3 O3 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

420 in 4 structures; the first of them:

  • 2WVP · Synthetically modified OmpG · 420 A1284 · binds GLU15, TYR196, THR207, PRO208, CYS209, GLY237, LEU238, PHE239 and 2 more
  • 2YJ0 · X-ray structure of chemically engineered Mycobacterium tuberculosis Dodecin · 420 A100 · binds GLU9, VAL11, GLN42, SER43, ARG45, GLN57, CYS59
  • 2WVP · Synthetically modified ompg · 420 A1284 · binds GLU15, TYR196, THR207, PRO208, CYS209, GLY237, LEU238, PHE239 and 2 more
  • 2YJ0 · X-ray structure of chemically engineered mycobacterium tuberculosis dodecin · 420 A100 · binds GLU9, VAL11, GLN42, SER43, ARG45, GLN57, CYS59

Residues it binds most

GLN 12, GLU 14, VAL 12, ARG 12, CYS 14, SER 12, TYR 8, TRP 8, LYS 6, ASP 4 (residue and the binding sites it lines).

Found with

  • COA · Coenzyme A
  • FMN · Flavin mononucleotide
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • C8E · (hydroxyethyloxy)tri(ethyloxy)octane
  • EDO · 1,2-ethanediol

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