GL1X · GenesisL1 explorer

Ligand · 3Q9

3Q9 · 3-[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl) methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

3Q9, 3-[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl) methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid (C33 H40 N4 O6…

Component
3Q9
Formula
C33 H40 N4 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

3Q9 in 2 structures; the first of them:

  • 7ZBU · CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60 · 3Q9 A1309 · binds ASN99, ILE101, ARG102, GLY103, TRP104, ILE119, ASN121, VAL126 and 5 more
  • 7ZBU · Cryoem structure of SARS-cov-2 spike monomer in complex with neutralising antibody P008_60 · 3Q9 A1309 · binds ASN99, ILE101, ARG102, GLY103, TRP104, ILE119, ASN121, VAL126 and 5 more

Residues it binds most

ARG 2, ASN 2, ILE 2, GLY 2, HIS 2, LEU 2, MET 2, PHE 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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