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Ligand · 3GW

3GW · 5-(5-formylthiophen-2-yl)uridine-5'(2-(acetylamino)-2-deoxy-alpha-D-galactosyl)-diphosphate

3GW, 5-(5-formylthiophen-2-yl)uridine-5'(2-(acetylamino)-2-deoxy-alpha-D-galactosyl)-diphosphate (C22 H29 N3 O18 P2 S, 717.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
3GW
Formula
C22 H29 N3 O18 P2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

3GW in 2 structures; the first of them:

  • 3V0N · Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA… · 3GW B402 · binds PHE121, ALA122, ILE123, LYS124, TYR126, TRP181, VAL184, ARG188 and 15 more
  • 3V0N · Crystal structure of the fucosylgalactoside alpha N- acetylgalactosaminyltransferase… · 3GW B402 · binds PHE121, ALA122, ILE123, LYS124, TYR126, TRP181, VAL184, ARG188 and 15 more

Residues it binds most

ALA 2, ASP 2, TRP 2, GLY 2, VAL 2, ARG 2, GLU 2, HIS 2, ILE 2, LEU 2 (residue and the binding sites it lines).

Found with

  • 4GW · 5-(5-formylthiophen-2-yl)uridine 5'-(trihydrogen diphosphate)
  • MN · Manganese (II) ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

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