Ligand · 2PE
2PE · Nonaethylene glycol
2PE, Nonaethylene glycol (C18 H38 O10, 414.5 g/mol), in the MolNFT structures on GenesisL1: bound in 95 records (68 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- 2PE
- Formula
- C18 H38 O10
- Class
- additive
- Structures
- 95
- PDB entries
- 68
Binding sites
2PE in 95 structures; the first of them:
- 4X8J · Crystal Structure of murine 12F4 Fab monoclonal antibody against ADAMTS5 · 2PE H301 · binds TYR49, TYR91, PHE96, TRP33, PRO101, PHE102
- 5D7Z · Crystal structure of glyoxalase I from Zea mays · 2PE A308 · binds HIS96, VAL125, LYS126, ILE132, PHE134, MET142, GLU144, TYR191 and 3 more
- 5DFB · Crystal structure of BRD2(BD2) mutant W370F in the free form · 2PE A502 · binds SER347, LEU350, LYS351, ASN354, MET403, GLU404
- 5DFC · Crystal structure of BRD2(BD2) W370F mutant with ligand I-BET 762 bound · 2PE A502 · binds SER347, LEU350, LYS351, ASN354, MET403, GLU404, ARG406
- 5E2X · The crystal structure of the C-terminal domain of Ebola (Tai Forest) nucleoprotein · 2PE B801 · binds LEU666, TYR669, TYR688, HIS727, ASP709, PHE712, GLN719
- 5G1F · Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW)from Bacillus subtilis in… · 2PE A302 · binds TRP119, SER120, VAL122, TRP193, ASP195, GLY225, CYS226, ARG227
- 5MOY · Crystal structure of the BoNT/A2 receptor-binding domain in complex with the luminal… · 2PE A1302 · binds TRP946, ARG1013, TRP1014, LYS1070, GLN1091, SER1092, ASN1093, LYS1098 and 3 more
- 5OOS · Designed Ankyrin Repeat Protein (DARPin) YTRL-2 selected by directed evolution against… · 2PE A202 · binds ARG79, ASP110, ARG111, TYR112, ASP114, LEU119, GLU122, PHE145 and 1 more
- 5OYC · GH5 endo-xyloglucanase from Cellvibrio japonicus · 2PE B516 · binds THR361, ASP336, GLU337, SER338, TRP339, GLY340, LYS341, THR356 and 2 more
- 5V2C · Re-refinement of crystal structure of photosystem II complex · 2PE V216 · binds ASN13, SER14, GLU15, PRO64, PRO65, ARG66, ASN68, GLU70 and 5 more
- 5YQR · Crystal structure of the PH-like domain of Lam6 · 2PE A1301 · binds ASN2, PHE4, ASP72, ARG76
- 5Z75 · Artificial L-threonine 3-dehydrogenase designed by ancestral sequence reconstruction. · 2PE B402 · binds ALA76, THR77, GLU79, LYS80, ASP265, PHE266, ARG267
- 6EEE · X-ray crystal structure of Pf-M17 in complex with inhibitor (6k) and regulatory zinc ion · 2PE H1007 · binds TYR103, GLU316, LYS320
- 6EQL · Crystal Structure of Human Glycogenin-1 (GYG1) Tyr195pIPhe mutant complexed with… · 2PE B303 · binds ASP125, ASN133, SER134, GLY162, ASP163, GLN164, GLY215, ARG216
- 6EUN · Crystal structure of Neisseria meningitidis vaccine antigen NadA variant 3 · 2PE A207 · binds ASN144, GLY147, GLU148, THR151, ALA154, GLU155, LYS158, ALA142 and 3 more
- 6F5K · Crystal structure of laccase from Myceliophthora thermophila · 2PE A628 · binds TRP547, PRO548, ASN550, PRO551, TYR552, PRO553
- 6H31 · Staphylopine dehydrogenase in the apo state · 2PE A600 · binds LEU16, CYS20, SER24, VAL89, PHE144, MET182, ARG185
- 6KDY · Crystal structure of the alpha bata heterodimer of human IDH3 in complex with NAD. · 2PE D401 · binds HIS82, THR83, PRO84, MET85, GLU90, PRO276
- 6KM7 · The structural basis for the internal interaction in RBBP5 · 2PE A403 · binds ARG34, TRP35, VAL306, LEU400
- 6NPU · C-abl Kinase domain with the activator(cmpd29)… · 2PE B606 · binds GLU428, TYR432, LYS434, PRO499
- 6O0K · crystal structure of BCL-2 with venetoclax · 2PE A302 · binds ARG12, MET16, TRP30, ALA32, ASP171, ASN172, ALA174, LEU175 and 1 more
- 6O34 · Crystal Structure Analysis of PIN1 · 2PE A201 · binds TYR23, ALA31, SER32, GLN33, TRP34, ILE93, LYS97, MET146 and 2 more
- 6UVZ · Amidohydrolase 2 from Bifidobacterium longum subsp. infantis · 2PE A301 · binds VAL92, PRO93, LYS128, LEU130
- 6VOS · Crystal structure of macaque anti-HIV-1 antibody RM20J · 2PE H302 · binds GLY139, THR140, THR188, VAL189, PRO190
- 6XBO · X-ray crystal structure of the mouse CMP-Sialic acid transporter in complex with 5-methyl… · 2PE A415 · binds LEU199, LYS200, SER202, ASP203, THR204, SER205, LEU206, LYS265 and 1 more
- 6YB1 · Crystal structure of an antiparallel octameric transmembrane coiled coil K2-CCTM-VbIc · 2PE C101 · binds VAL23, ALA12, THR15, VAL16
- 7D7P · Crystal structure of the phosphodiesterase domain of Salpingoeca rosetta rhodopsin… · 2PE A801 · binds LYS380, GLY381, SER383, ALA384, ALA385, GLN427, PHE428, ASN429 and 3 more
Residues it binds most
LEU 63, GLY 61, ARG 67, PRO 53, VAL 46, GLU 54, LYS 54, SER 57, TYR 47, ASP 51 (residue and the binding sites it lines).
Found with
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