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Ligand · 2ME

2ME · Methoxyethane

2ME, Methoxyethane (C3 H8 O, 60.1 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
2ME
Formula
C3 H8 O
Class
ligand
Structures
8
PDB entries
5

Binding sites

2ME in 8 structures; the first of them:

  • 6L0Z · The crystal structure of Salmonella enterica sugar-binding protein MalE · 2ME A402 · binds ARG344, THR345, ILE348, ASN349, ARG354
  • 6L3E · Crystal structure of Salmonella enterica sugar-binding protein MalE · 2ME A402 · binds ARG344, THR345, ASN349
  • 7FFW · The crystal structure of a domain-swapped dimeric maltodextrin-binding protein MalE from… · 2ME A402 · binds ALA301, VAL302, GLN308, MET321
  • 5WWD · Crystal structure of ATNUDX1 · 2ME A202 · binds ASN75, ASN76, VAL77, TRP128, LYS132
  • 5XHK · Crystal structure of the BRD2-BD2 in complex with phenanthridinone · 2ME A503 · binds TRP370, PRO371, HIS433, VAL435
  • 6L0Z · The crystal structure of salmonella enterica sugar-binding protein male · 2ME A402 · binds ARG344, THR345, ASN349
  • 6L3E · Crystal structure of salmonella enterica sugar-binding protein male · 2ME A402 · binds ARG344, THR345, ASN349
  • 7FFW · The crystal structure of a domain-swapped dimeric maltodextrin-binding protein male from… · 2ME A402 · binds VAL302, MET321

Residues it binds most

ARG 8, ASN 5, MET 6, VAL 6, GLU 4, TRP 5, PHE 4, THR 4, TYR 4, ALA 3 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol
  • GLC · alpha-D-glucopyranose
  • MPD · (4S)-2-methyl-2,4-pentanediol
  • MG · Magnesium ion
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol
  • ASO · 1,5-anhydro-D-glucitol
  • BGC · beta-D-glucopyranose
  • LDR · phenanthridin-6(5H)-one
  • NH4 · Ammonium ion

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