GL1X · GenesisL1 explorer

Ligand · 1WD

1WD · 3-sulfanylpyridine-2-carboxylic acid

1WD, 3-sulfanylpyridine-2-carboxylic acid (C6 H5 N O2 S, 155.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
1WD
Formula
C6 H5 N O2 S
Class
ligand
Structures
6
PDB entries
3

Binding sites

1WD in 6 structures; the first of them:

  • 4YW8 · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid · 1WD A704 · binds ARG87, TYR235, GLY237, LYS243, LYS244, HIS264, SER286, ASP311 and 3 more
  • 4YW9 · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and GTP · 1WD A706 · binds ARG87, TYR235, GLY237, LYS243, LYS244, HIS264, SER286, ASP311 and 3 more
  • 4YWB · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and oxalic acid · 1WD A705 · binds PHE284, CYS288, GLY289, GLY434, GLY435, ARG436, SER462, VAL514 and 3 more
  • 4YW8 · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid · 1WD A704 · binds ARG87, TYR235, GLY237, LYS243, LYS244, HIS264, SER286, ASP311 and 3 more
  • 4YW9 · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and GTP · 1WD A706 · binds ARG87, TYR235, GLY237, LYS243, LYS244, HIS264, SER286, ASP311 and 3 more
  • 4YWB · Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and oxalic acid · 1WD A705 · binds PHE284, CYS288, GLY289, GLY434, GLY435, ARG436, SER462, VAL514 and 3 more

Residues it binds most

GLY 10, PHE 10, ARG 10, LYS 4, SER 8, ASN 6, CYS 6, TRP 6, VAL 6, ASP 4 (residue and the binding sites it lines).

Found with

  • MN · Manganese (II) ion
  • NA · Sodium ion
  • MOH · Methanol
  • GTP · Guanosine-5'-triphosphate
  • MEE · Methanethiol
  • OXD · Oxalic acid
  • CL · Chloride ion
  • 1PE · Pentaethylene glycol
  • EDO · 1,2-ethanediol

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