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Ligand · 1QQ

1QQ · (3S)-3-methyl-2-oxopentanoic acid

1QQ, (3S)-3-methyl-2-oxopentanoic acid (C6 H10 O3, 130.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
1QQ
Formula
C6 H10 O3
Class
ligand
Structures
5
PDB entries
4

Binding sites

1QQ in 5 structures; the first of them:

  • 4OBB · The crystal structure of a solute-binding protein from Anabaena variabilis ATCC 29413 in… · 1QQ A501 · binds LEU70, THR130, LEU131, SER132, SER153, ASN154, THR155, ALA156 and 5 more
  • 8IXH · Pseudomoans aeruginosa Wildtype Ketopantoate Reductase With 3-Methyl-2-oxovalerate at… · 1QQ A401 · binds ASN108, CYS131, PHE132, ILE133, CYS134, TYR148, LYS196, TRP199 and 3 more
  • 8JDZ · Crystal structure of mLDHD in complex with 2-keto-3-methylvaleric acid · 1QQ A503 · binds VAL101, ARG347, TRP351, SER365, VAL396, HIS398, HIS405, ILE407 and 2 more
  • 1JD2 · Crystal structure of the yeast 20S PROTEASOME:TMC-95A complex: a non- covalent proteasome… · 1QQ 81 · binds GLN22, ASP-7, SER-5, ASP114, LEU115, TYR2, ASN3
  • 4OBB · The crystal structure of a solute-binding protein from anabaena variabilis atcc 29413 in… · 1QQ A501 · binds LEU70, THR130, LEU131, SER132, SER153, ASN154, THR155, ALA156 and 5 more

Residues it binds most

ASN 9, LEU 6, PHE 7, SER 7, THR 4, TYR 5, CYS 3, ALA 4, ASP 2, GLY 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • AKK · (1Z)-prop-1-en-1-amine
  • FAD · Flavin-adenine dinucleotide
  • MN · Manganese (II) ion
  • GOL · Glycerol

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