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Ligand · 1PL

1PL · (1S,3aS,5aR,8aS)-1,7,7-trimethyl-1,2,3,3a,5a,6,7,8-octahydrocyclopenta[c]pentalene-4-carboxylic acid

1PL, (1S,3aS,5aR,8aS)-1,7,7-trimethyl-1,2,3,3a,5a,6,7,8-octahydrocyclopenta[c]pentalene-4-carboxylic acid (C15 H22 O2, 234.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its…

Component
1PL
Formula
C15 H22 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

1PL in 4 structures; the first of them:

  • 2RDN · Crystal Structure of PtlH with AKG and ent-1PL bound · 1PL A280 · binds ARG117, THR134, PRO135, HIS137, PHE141, TYR142, ARG188, VAL193 and 4 more
  • 2RDS · Crystal Structure of PtlH with Fe/oxalylglycine and ent-1-deoxypentalenic acid bound · 1PL A269 · binds THR115, ARG117, THR134, PRO135, HIS137, TYR142, ARG188, VAL193 and 1 more
  • 2RDN · Crystal structure of ptlh with akg and ent-1PL bound · 1PL A280 · binds ARG117, THR134, PRO135, HIS137, PHE141, TYR142, ARG188, VAL193 and 4 more
  • 2RDS · Crystal structure of ptlh with FE/OXALYLGLYCINE and ent-1- deoxypentalenic acid bound · 1PL A269 · binds THR115, ARG117, THR134, PRO135, HIS137, TYR142, ARG188, VAL193 and 1 more

Residues it binds most

ARG 4, THR 4, HIS 4, PRO 4, TYR 4, VAL 4, ALA 2, ILE 2, PHE 2, SER 2 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • MG · Magnesium ion
  • AKG · 2-oxoglutaric acid
  • OGA · N-oxalylglycine

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