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Ligand · 12U

12U · N-cycloheptylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide

12U, N-cycloheptylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide (C22 H33 N5 O2, 399.5 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
12U
Formula
C22 H33 N5 O2
Class
ligand
Structures
6
PDB entries
3

Binding sites

12U in 6 structures; the first of them:

  • 2ZFS · Exploring trypsin S3 pocket · 12U A501 · binds HIS57, ASN97, THR98, LEU99, GLN175, ASP189, SER190, CYS191 and 10 more
  • 2ZHD · Exploring trypsin S3 pocket · 12U A501 · binds HIS57, ASN97, THR98, LEU99, GLN175, ASP189, SER190, CYS191 and 11 more
  • 2ZHW · Exploring thrombin S3 pocket · 12U H501 · binds HIS57, TYR60A, TRP60D, LEU99, ASP189, ALA190, CYS191, GLU192 and 8 more
  • 2ZFS · Exploring trypsin S3 pocket · 12U A501 · binds HIS57, ASN97, THR98, LEU99, GLN175, ASP189, SER190, CYS191 and 10 more
  • 2ZHD · Exploring trypsin S3 pocket · 12U A501 · binds HIS57, ASN97, THR98, LEU99, GLN175, ASP189, SER190, CYS191 and 11 more
  • 2ZHW · Exploring thrombin S3 pocket · 12U H501 · binds HIS57, TYR60A, TRP60D, LEU99, ASP189, ALA190, CYS191, GLU192 and 8 more

Residues it binds most

GLY 6, SER 6, CYS 6, GLN 4, TRP 6, ASP 6, HIS 6, LEU 6, TYR 6, VAL 6 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • GOL · Glycerol
  • NA · Sodium ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide

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