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Ligand · 0YT

0YT · 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose

0YT, 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose (C8 H15 N O5 S, 237.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
0YT
Formula
C8 H15 N O5 S
Class
sugar
Structures
2
PDB entries
1

Binding sites

0YT in 2 structures; the first of them:

  • 4GZ3 · Crystal structure of human O-GlcNAc Transferase with UDP and a thioglycopeptide · 0YT B101 · binds HIS498, MET501, HIS558, PRO559, THR560, LEU563, LEU653, GLY654 and 8 more
  • 4GZ3 · Crystal structure of human O-glcnac transferase with udp and a thioglycopeptide · 0YT B101 · binds HIS498, MET501, HIS558, PRO559, THR560, LEU563, LEU653, GLY654 and 8 more

Residues it binds most

HIS 4, LEU 4, PRO 4, THR 4, CYS 4, GLY 4, LYS 4, MET 4, PHE 4, SER 4 (residue and the binding sites it lines).

Found with

  • UDP · Uridine-5'-diphosphate
  • SO4 · Sulfate ion

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