GL1X · GenesisL1 explorer

Ligand · 0GE

0GE · N-{[5-(dimethylamino)naphthalen-1-yl]sulfonyl}-L-alpha-glutamyl-N-[(2S,3S)-6-carbamimidamido-1-chloro-2-hydroxyhexan-3-yl]glycinamide

0GE, N-{[5-(dimethylamino)naphthalen-1-yl]sulfonyl}-L-alpha-glutamyl-N-[(2S,3S)-6-carbamimidamido-1-chloro-2-hydroxyhexan-3-yl]glycinamide (C26 H38 Cl N7 O7 S, 628.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB…

Component
0GE
Formula
C26 H38 Cl N7 O7 S
Class
ligand
Structures
6
PDB entries
3

Binding sites

0GE in 6 structures; the first of them:

  • 1CVW · Crystal structure of active site-inhibited human coagulation factor VIIA (DES-GLA) · 0GE H301 · binds CYS42, HIS57, CYS58, THR99, GLY170F, PRO170I, ASP189, SER190 and 13 more
  • 3TH3 · Mg2+ Is Required for Optimal Folding of the Gamma-Carboxyglutamic Acid (Gla) Domains of… · 0GE H301 · binds CYS42, HIS57, THR99, ASP170G, PRO170I, ASP189, SER190, CYS191 and 11 more
  • 3TH4 · Mg2+ Is Required for Optimal Folding of the Gamma-Carboxyglutamic Acid (Gla) Domains of… · 0GE L211 · binds HIS57, GLY97, THR99, ASP170G, PRO170I, ASP189, SER190, CYS191 and 13 more
  • 1CVW · Crystal structure of active site-inhibited human coagulation factor viia (des-gla) · 0GE H301 · binds CYS42, HIS57, CYS58, THR99, GLY170F, PRO170I, ASP189, SER190 and 13 more
  • 3TH3 · MG2+ is required for optimal folding of the gamma-carboxyglutamic acid (gla) domains of… · 0GE H301 · binds CYS42, HIS57, THR99, ASP170G, PRO170I, ASP189, SER190, CYS191 and 11 more
  • 3TH4 · MG2+ is required for optimal folding of the gamma-carboxyglutamic acid (gla) domains of… · 0GE L211 · binds HIS57, GLY97, THR99, ASP170G, PRO170I, ASP189, SER190, CYS191 and 13 more

Residues it binds most

GLY 6, CYS 6, SER 6, ASP 6, VAL 6, GLN 6, HIS 6, LYS 6, PRO 6, THR 6 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BGC · beta-D-glucopyranose
  • FUC · alpha-L-fucopyranose
  • CL · Chloride ion
  • MG · Magnesium ion
  • NA · Sodium ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.