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Ligand · 0D3

0D3 · N-[(2S)-2-benzyl-3-sulfanylpropanoyl]-L-alanylglycinamide

0D3, N-[(2S)-2-benzyl-3-sulfanylpropanoyl]-L-alanylglycinamide (C15 H21 N3 O3 S, 323.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
0D3
Formula
C15 H21 N3 O3 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

0D3 in 2 structures; the first of them:

  • 1JAO · Complex of 3-mercapto-2-benzylpropanoyl-ala-gly-NH2 with the catalytic domain of matrix… · 0D3 A1 · binds GLY158, ILE159, LEU160, ALA161, TYR189, LEU193, VAL194, HIS197 and 8 more
  • 1JAO · Complex of 3-mercapto-2-benzylpropanoyl-ala-gly-NH2 with the catalytic domain of matrix… · 0D3 A1 · binds GLY158, ILE159, LEU160, ALA161, TYR189, LEU193, VAL194, HIS197 and 8 more

Residues it binds most

HIS 2, LEU 2, TYR 2, ALA 2, ASN 2, GLU 2, GLY 2, ILE 2, PRO 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion

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