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Ligand · 07B

07B · dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate

07B, dimethyl (1S,2S,4S,5S)-4,5-dihydroxycyclohexane-1,2-dicarboxylate (C10 H16 O6, 232.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
07B
Formula
C10 H16 O6
Class
ligand
Structures
4
PDB entries
2

Binding sites

07B in 4 structures; the first of them:

  • 2XR5 · Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN… · 07B A1385 · binds VAL351, GLY352
  • 2XR6 · Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN… · 07B A1386 · binds VAL351
  • 2XR5 · Crystal structure of the complex of the carbohydrate recognition domain of human dc-sign… · 07B A1385 · binds VAL351, GLY352
  • 2XR6 · Crystal structure of the complex of the carbohydrate recognition domain of human dc-sign… · 07B A1386 · binds VAL351

Residues it binds most

VAL 4, GLY 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • MAN · alpha-D-mannopyranose
  • CL · Chloride ion
  • AE9 · 2-azidoethanol
  • ETA · Ethanolamine

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