MolNFT v2 · #69196 · protein + DNA

Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion

3KHL: “Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion”. X-ray diffraction at 2.1. MolNFT v2 #69196 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3KHL
Type: protein + DNA
Length: 743 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.1
Source: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
UniProt: Q97W02

Structure

x-ray diffraction · resolution 2.1 · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	341	—	Q97W02
D, H	—	dna	13	—	—
E	—	dna	17	—	—
J	—	dna	18	—	—

Compared structures

3KHL · DPO4 post-extension ternary complex with misinserted a opposite the 2… · the same entry in another collection · chain J against J, TM-score 1.00
Q97W02 · AlphaFold monomer V2.0 prediction for DNA polymerase IV (Q97W02) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97W02
Elsewhere: RCSB PDB 3KHL · PDBe 3KHL · UniProt Q97W02

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