MolNFT v2 · #59905 · protein
Crystal structure of a putative glutathione s-transferase (reut_a1011) from ralstonia eutropha jmp134 at 2.05 A resolution
3CBU · Probable gst-related protein: “Crystal structure of a putative glutathione s-transferase (reut_a1011) from ralstonia eutropha jmp134 at 2.05…”. X-ray diffraction at 2.05, 1 ligand (PO4), 2 pockets (best druggability 0.84). MolNFT v2…
- PDB
- 3CBU
- Type
- protein
- Length
- 424 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.05
- Source
- Ralstonia eutropha
- Molecule
- Probable gst-related protein
- UniProt
- Q473P3
- Ligands
- PO4
- Pockets
- 2 · best druggability 0.84
Structure
x-ray diffraction · resolution 2.05 · 2 distinct chains · 57% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable gst-related protein | protein | 211 | 58% helix, 9% strand | Q473P3 |
| B | Probable gst-related protein | protein | 213 | 57% helix, 8% strand | Q473P3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 966 | 0.84 | 0.85 | 110 | EDO |
| 2 | 228 | 0.52 | 0.77 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 1437 Ų buried · 10 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3CBU · Crystal structure of a putative glutathione S-transferase (REUT_A1011) from ralstonia… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q473P3
- Elsewhere: RCSB PDB 3CBU · PDBe 3CBU · UniProt Q473P3
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