MolNFT v2 · #226448 · protein
Crystal structure of the F99S/M153T/V163A/T203V variant of GFP at pH 7.5
8ZUS · Green fluorescent protein: “Crystal structure of the F99S/M153T/V163A/T203V variant of GFP at pH 7.5”. X-ray diffraction at 1.2, 1 ligand (MG), 1 pocket (best druggability 0.77). MolNFT v2 #226448 on GenesisL1: 3D structure, binding…
- PDB
- 8ZUS
- Type
- protein
- Length
- 227 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.2
- Source
- Aequorea victoria
- Molecule
- Green fluorescent protein
- UniProt
- P42212
- Ligands
- MG
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · resolution 1.2 · 1 distinct chain · 12% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Green fluorescent protein | protein | 227 | 12% helix, 52% strand | P42212 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.77 | 0.99 | 23 | empty |
Compared structures
- P42212 · AlphaFold monomer V2.0 prediction for green fluorescent protein (P42212) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42212
- Elsewhere: RCSB PDB 8ZUS · PDBe 8ZUS · UniProt P42212
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