MolNFT v2 · #219441 · protein

SSX structure of Lysozyme grown in batch conditions

8S2U · Lysozyme C: “SSX structure of Lysozyme grown in batch conditions”. X-ray diffraction at 1.8, 1 ligand (CL), 1 pocket (best druggability 0.32). MolNFT v2 #219441 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 8S2U
Type: protein
Length: 129 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.8
Source: Gallus gallus
Molecule: Lysozyme C
EC: 3.2.1.17
UniProt: P00698
Ligands: CL
Pockets: 1 · best druggability 0.32

Structure

x-ray diffraction · resolution 1.8 · 1 distinct chain · 41% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lysozyme C (EC 3.2.1.17)	protein	129	41% helix, 11% strand	P00698

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	57	0.32	0.76	13	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00698
Elsewhere: RCSB PDB 8S2U · PDBe 8S2U · UniProt P00698

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